From 0d917decada2ca1b5bd9200d769b7b6892596fa4 Mon Sep 17 00:00:00 2001
From: Martin Schneider <martin.schneider@iws.uni-stuttgart.de>
Date: Mon, 3 Apr 2023 14:20:47 +0200
Subject: [PATCH] Revert file addition
---
.vscode/settings.json | 54 ----
slides/index.html | 729 ------------------------------------------
2 files changed, 783 deletions(-)
delete mode 100644 .vscode/settings.json
delete mode 100644 slides/index.html
diff --git a/.vscode/settings.json b/.vscode/settings.json
deleted file mode 100644
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--- a/.vscode/settings.json
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@@ -1,54 +0,0 @@
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- "new": "cpp",
- "numbers": "cpp",
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- }
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\ No newline at end of file
diff --git a/slides/index.html b/slides/index.html
deleted file mode 100644
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-<!DOCTYPE html>
-<html>
-<head>
- <meta charset="utf-8">
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- <title>Material system</title>
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- <div class="reveal">
- <div class="slides">
-
-<section id="title-slide">
- <h1 class="title">Material system</h1>
-</section>
-
-<section>
-<section id="introduction-to-dumux--material-system"
-class="title-slide slide level1">
-<h1>Introduction to DuMuX- Material system</h1>
-
-</section>
-<section id="challenges-in-simulating-porous-media"
-class="slide level2">
-<h2>Challenges in simulating porous media:</h2>
-<ul>
-<li><p>Highly heterogeneous distribution of parameters and complex
-nonlinear material laws</p></li>
-<li><p>Strong interconnection of properties <strong>—></strong>
-difficult to achieve modularity</p></li>
-</ul>
-</section>
-<section id="modular-structure" class="slide level2">
-<h2>Modular structure:</h2>
-<ins>
-User-defined parameters and relationships:
-</ins>
-<ul>
-<li>Components</li>
-<li>Fluid system</li>
-<li>Solid system</li>
-<li>Binary coefficients</li>
-<li>Fluid-matrix interactions</li>
-<li>Chemistry</li>
-</ul>
-</section>
-<section id="dumux-specific-containers-and-solvers"
-class="slide level2">
-<h2><ins> Dumux-specific containers and solvers </ins></h2>
-<ul>
-<li>Fluid states</li>
-<li>Solid states</li>
-<li>Constraint solvers</li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-component"
-class="title-slide slide level1">
-<h1>Material system: Component</h1>
-
-</section>
-<section id="component" class="slide level2">
-<h2>Component</h2>
-<p><img src="img/component.png" width="200"/></p>
-</section>
-<section id="what-it-does" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<ul>
-<li><strong>Thermodynamic relations</strong> (e.g. molar mass, vapor
-pressure, density) of a <strong>single chemical species</strong> or a
-fixed mixture of species</li>
-<li>Provide a convenient way to access these quantities</li>
-<li>Not supposed to be used by models directly</li>
-</ul>
-</section>
-<section id="example-implementations" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li><p><em>H2O</em> : pure water, properties by IAPWS-97 or
-simplified</p></li>
-<li><p><em>Brine</em> : water with a given salt concentration</p></li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-fluid-system"
-class="title-slide slide level1">
-<h1>Material system: Fluid system</h1>
-
-</section>
-<section id="fluid-system" class="slide level2">
-<h2>Fluid system</h2>
-<p><img src="img/fluidsystem.png" width="300"/></p>
-</section>
-<section id="what-it-does-1" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<p>Expresses the <strong>thermodynamic relations between fluid
-quantities</strong> (e.g. calculation of density or viscosity based on
-composition, fugacity coefficient based on temperature and
-pressure…)</p>
-</section>
-<section id="example-implementations-1" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li><p><em>TwoPImmiscible</em> : two immiscible fluid phases</p></li>
-<li><p><em>H2OAir</em> : gas and liquid phase with components water and
-air</p></li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-binary-coefficients"
-class="title-slide slide level1">
-<h1>Material system: Binary coefficients</h1>
-
-</section>
-<section id="binary-coefficients" class="slide level2">
-<h2>Binary coefficients</h2>
-<p><img src="img/binarycoefficients.png" width="350"/></p>
-</section>
-<section id="what-it-does-2" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<p><strong>Contains</strong> data and equations required for binary
-mixtures (e.g. binary diffusion coefficients, coefficients needed for
-constitutive relationships (like Henry coefficient))</p>
-</section>
-<section id="example-implementations-2" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li><em>H2O_Air</em> : Henry coefficient, gas diffusion coefficient,
-liquid diffusion coefficent for water and air</li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-solid-system"
-class="title-slide slide level1">
-<h1>Material system: Solid system</h1>
-
-</section>
-<section id="solid-system" class="slide level2">
-<h2>Solid system</h2>
-<p><img src="img/solidsystem.png" width="300"/></p>
-</section>
-<section id="what-it-does-3" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<p>Expresses the <strong>thermodynamic properties of the solid
-matrix</strong> (e.g. calculation of the solid density and solid heat
-capacity based on the composition…)</p>
-<ins>
-Note to solid system
-</ins>
-<p><em>Specifying a solid system is only necessary if you work with a
-non-isothermal or mineralization model. If no solid system is specified
-in the problem file, the default is the inert solid phase with the
-constant component. For the constant component you can set properties in
-the input file.</em></p>
-</section>
-<section id="implementations" class="slide level2">
-<h2><ins> Implementations: </ins></h2>
-<ul>
-<li><em>OneCSolid</em> : inert solid matrix of one solid component
-(e.g. granite)</li>
-<li><em>CompositionalSolidPhase</em> : composed solid matrix of inert or
-reactive components (e.g. NaCl and granite)</li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-fluid-matrix-interactions"
-class="title-slide slide level1">
-<h1>Material system: Fluid-matrix interactions</h1>
-
-</section>
-<section id="fluid-materix-interactions" class="slide level2">
-<h2>Fluid-materix interactions</h2>
-<p><img src="img/fluidmatrixinteractions.png" width="250"/></p>
-</section>
-<section id="what-it-does-4" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<ul>
-<li>Description of the <strong>interaction of the fluid phases with the
-porous medium</strong> (e.g. capillary pressure-saturation and relative
-permeability relationships)</li>
-<li>Through modular adapters, regularization schemes can be imposed for
-extreme values</li>
-</ul>
-</section>
-<section id="example-implementations-3" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li>Available parametrizations for the capillary pressure-saturation
-relationship are:
-<ul>
-<li><em>Van Genuchten</em></li>
-<li><em>Brooks Corey</em></li>
-</ul></li>
-</ul>
-</section>
-<section id="van-genuchten" class="slide level2">
-<h2>Van-Genuchten</h2>
-<p><span class="math inline">\(\begin{equation} p_c =
-\frac{1}{\alpha}\left(S_e^{-1/m} -1\right)^{1/n}
-\end{equation}\)</span></p>
-<p><img src="img/pc-Sw_VanGenuchten.png" width="500"/></p>
-<p><strong>—></strong> Necessary are here the empirical parameters
-<span class="math inline">\(\alpha\)</span> and <span
-class="math inline">\(n\)</span>.</p>
-</section>
-<section id="brooks-corey" class="slide level2">
-<h2>Brooks-Corey</h2>
-<p><span class="math inline">\(\begin{equation} p_c = p_d
-S_e^{-1/\lambda} \end{equation}\)</span></p>
-<p><img src="img/pc-Sw_BrooksCorey.png" width="500"/></p>
-<p><strong>—></strong> Necessary parameters are here the entry
-pressure <span class="math inline">\(p_d\)</span> and the shape factor
-<span class="math inline">\(\lambda\)</span>.</p>
-</section></section>
-<section>
-<section id="material-system-chemistry"
-class="title-slide slide level1">
-<h1>Material system: Chemistry</h1>
-
-</section>
-<section id="chemistry" class="slide level2">
-<h2>Chemistry</h2>
-<p><img src="img/chemistry.png" width="200"/></p>
-</section>
-<section id="what-it-does-5" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<p>Reactions between different components. There are extra models or
-they are realized with the introduction of a source term.</p>
-<p><strong>Note:</strong> <em>This contains some specific example
-implementations. One can implement specific things according to their
-need.</em></p>
-</section>
-<section id="example-implementations-4" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<p>Expresses the <strong>electrochemical models for a fuel cell
-application</strong>:</p>
-<ul>
-<li><em>Electrochemistry</em> : for isothermal system</li>
-<li><em>Electrochemistryni</em> : for non-isothermal system</li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-fluid-state"
-class="title-slide slide level1">
-<h1>Material system: Fluid state</h1>
-
-</section>
-<section id="fluid-state" class="slide level2">
-<h2>Fluid state</h2>
-<p><img src="img/fluidstate.png" width="800"/></p>
-</section>
-<section id="what-it-does-6" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<ul>
-<li><strong>Stores</strong> the complete thermodynamic configuration of
-a system at a given spatial and temporal position (e.g. saturation, mole
-fraction, enthalpy)</li>
-<li><strong>Provides access</strong> methods to all thermodynamic
-quantities (e.g. saturation, mole fraction, enthalpy)</li>
-</ul>
-</section>
-<section id="example-implementations-5" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li><em>ImmiscibleFluidState</em> : assumes immiscibility of the fluid
-phases. Phase compositions and fugacity coefficients do not need to be
-stored explicitly.</li>
-<li><em>CompositionalFluidState</em> : assumes thermodynamic
-equilibrium, only a single temperature needs to be stored.</li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-solid-state"
-class="title-slide slide level1">
-<h1>Material system: Solid state</h1>
-
-</section>
-<section id="solid-state" class="slide level2">
-<h2>Solid state</h2>
-<p><img src="img/solidstate.png" width="800"/></p>
-</section>
-<section id="what-it-does-7" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<ul>
-<li><strong>Stores</strong> the complete solid configuration of a system
-at a given spatial and temporal position (e.g. solid volume fractions,
-solid heat capacity)</li>
-<li><strong>Provides</strong> access methods to all solid quantities
-(e.g. porosity, density, temperature)</li>
-</ul>
-</section>
-<section id="example-implementations-6" class="slide level2">
-<h2><ins> Example implementations: </ins></h2>
-<ul>
-<li><p><em>InertSolidState</em> : assumes an inert solid phase. Solid
-volume fractions do not change. This is the
-<strong>default</strong>.</p></li>
-<li><p><em>CompositionalSolidState</em> : assumes a solid matrix
-composed out of two components. The volume fractions can change and
-properties such as heat capacity are adapted.</p></li>
-</ul>
-</section></section>
-<section>
-<section id="material-system-constraint-solver"
-class="title-slide slide level1">
-<h1>Material system: Constraint Solver</h1>
-
-</section>
-<section id="constraint-solver" class="slide level2">
-<h2>Constraint solver</h2>
-<p><img src="img/constraintsolver.png" width="1000"/></p>
-</section>
-<section id="what-it-does-8" class="slide level2">
-<h2><ins> What it does: </ins></h2>
-<p><strong>Connects</strong> the thermodynamic relations expressed by
-fluid systems with the thermodynamic quantities stored by fluid states
-(e.g. mole fraction, density)</p>
-</section>
-<section id="example-implementation" class="slide level2">
-<h2><ins> Example implementation: </ins></h2>
-<p><em>CompositionFromFugacities</em> : takes all component fugacities,
-the temperature and pressure of a phase as input and calculates the
-phase composition</p>
-</section></section>
-<section>
-<section id="example-from-component-to-fluid-system"
-class="title-slide slide level1">
-<h1>Example: From component to fluid system</h1>
-
-</section>
-<section id="component-fluid-system" class="slide level2">
-<h2>Component <strong>—></strong> fluid system</h2>
-<p><img src="img/component-fluidsystem.png" width="500"/></p>
-</section>
-<section id="example-2-phases-miscible" class="slide level2">
-<h2>Example: 2 phases, miscible</h2>
-<ul>
-<li>Components: <em>H2O</em>, <em>Air</em></li>
-<li>Fluid system: <em>TwoPTwoC</em></li>
-</ul>
-</section>
-<section id="include-headers-in-properties-file-components"
-class="slide level2">
-<h2>Include headers in properties file: components</h2>
-<div class="sourceCode" id="cb1"><pre
-class="sourceCode cpp"><code class="sourceCode cpp"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="co">// The two-phase fluid system for compents water and air</span></span>
-<span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="pp">#include </span><span class="im"><dumux/material/fluidsystems/h2oair.hh></span></span>
-<span id="cb1-3"><a href="#cb1-3" aria-hidden="true" tabindex="-1"></a><span class="co">// The water component</span></span>
-<span id="cb1-4"><a href="#cb1-4" aria-hidden="true" tabindex="-1"></a><span class="pp">#include </span><span class="im"><dumux/material/components/h2o.hh></span></span>
-<span id="cb1-5"><a href="#cb1-5" aria-hidden="true" tabindex="-1"></a><span class="co">// The air component</span></span>
-<span id="cb1-6"><a href="#cb1-6" aria-hidden="true" tabindex="-1"></a><span class="pp">#include </span><span class="im"><dumux/material/components/air.hh></span></span></code></pre></div>
-</section>
-<section id="specify-fluid-system-in-properties-file"
-class="slide level2">
-<h2>Specify fluid system in properties file:</h2>
-<div class="sourceCode" id="cb2"><pre
-class="sourceCode cpp"><code class="sourceCode cpp"><span id="cb2-1"><a href="#cb2-1" aria-hidden="true" tabindex="-1"></a><span class="kw">template</span><span class="op"><</span><span class="kw">class</span> TypeTag<span class="op">></span></span>
-<span id="cb2-2"><a href="#cb2-2" aria-hidden="true" tabindex="-1"></a><span class="kw">struct</span> FluidSystem<span class="op"><</span>TypeTag<span class="op">,</span> TTag<span class="op">::</span>H2OAir<span class="op">></span></span>
-<span id="cb2-3"><a href="#cb2-3" aria-hidden="true" tabindex="-1"></a><span class="op">{</span></span>
-<span id="cb2-4"><a href="#cb2-4" aria-hidden="true" tabindex="-1"></a><span class="kw">private</span><span class="op">:</span></span>
-<span id="cb2-5"><a href="#cb2-5" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> Scalar <span class="op">=</span> GetPropType<span class="op"><</span>TypeTag<span class="op">,</span> Properties<span class="op">::</span>Scalar<span class="op">>;</span></span>
-<span id="cb2-6"><a href="#cb2-6" aria-hidden="true" tabindex="-1"></a><span class="kw">public</span><span class="op">:</span></span>
-<span id="cb2-7"><a href="#cb2-7" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> type <span class="op">=</span> FluidSystems<span class="op">::</span>H2OAir<span class="op"><</span>Scalar<span class="op">,</span></span>
-<span id="cb2-8"><a href="#cb2-8" aria-hidden="true" tabindex="-1"></a> Components<span class="op">::</span>TabulatedComponent</span>
-<span id="cb2-9"><a href="#cb2-9" aria-hidden="true" tabindex="-1"></a> <span class="op"><</span>Components<span class="op">::</span>H2O<span class="op"><</span>Scalar<span class="op">>>,</span></span>
-<span id="cb2-10"><a href="#cb2-10" aria-hidden="true" tabindex="-1"></a> FluidSystems<span class="op">::</span>H2OAirDefaultPolicy</span>
-<span id="cb2-11"><a href="#cb2-11" aria-hidden="true" tabindex="-1"></a> <span class="op"><</span><span class="co">/*fastButSimplifiedRelations=*/</span><span class="kw">true</span><span class="op">>,</span></span>
-<span id="cb2-12"><a href="#cb2-12" aria-hidden="true" tabindex="-1"></a> <span class="kw">true</span> <span class="co">/*useKelvinEquation*/</span><span class="op">>;</span></span>
-<span id="cb2-13"><a href="#cb2-13" aria-hidden="true" tabindex="-1"></a><span class="op">};</span></span></code></pre></div>
-</section></section>
-<section>
-<section id="example-from-component-to-solid-system"
-class="title-slide slide level1">
-<h1>Example: From component to solid system</h1>
-
-</section>
-<section id="example-2-phases-miscible-1" class="slide level2">
-<h2>Example: 2 phases, miscible</h2>
-<ul>
-<li>Components: <em>CaO</em>, <em>CaO2H2</em> (slaked lime)</li>
-<li>Solid system: <em>OnePNCMin</em></li>
-</ul>
-</section>
-<section id="specify-solid-system-in-properties-file"
-class="slide level2">
-<h2>Specify solid system in properties file:</h2>
-<div class="sourceCode" id="cb3"><pre
-class="sourceCode cpp"><code class="sourceCode cpp"><span id="cb3-1"><a href="#cb3-1" aria-hidden="true" tabindex="-1"></a><span class="co">// The solid system</span></span>
-<span id="cb3-2"><a href="#cb3-2" aria-hidden="true" tabindex="-1"></a><span class="kw">template</span><span class="op"><</span><span class="kw">class</span> TypeTag<span class="op">></span></span>
-<span id="cb3-3"><a href="#cb3-3" aria-hidden="true" tabindex="-1"></a><span class="kw">struct</span> SolidSystem<span class="op"><</span>TypeTag<span class="op">,</span> TTag<span class="op">::</span>ThermoChem<span class="op">></span></span>
-<span id="cb3-4"><a href="#cb3-4" aria-hidden="true" tabindex="-1"></a><span class="op">{</span></span>
-<span id="cb3-5"><a href="#cb3-5" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> Scalar <span class="op">=</span> GetPropType<span class="op"><</span>TypeTag<span class="op">,</span> Properties<span class="op">::</span>Scalar<span class="op">>;</span></span>
-<span id="cb3-6"><a href="#cb3-6" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> ComponentOne <span class="op">=</span> Components<span class="op">::</span>ModifiedCaO<span class="op"><</span>Scalar<span class="op">>;</span></span>
-<span id="cb3-7"><a href="#cb3-7" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> ComponentTwo <span class="op">=</span> Components<span class="op">::</span>CaO2H2<span class="op"><</span>Scalar<span class="op">>;</span></span>
-<span id="cb3-8"><a href="#cb3-8" aria-hidden="true" tabindex="-1"></a> <span class="kw">using</span> type <span class="op">=</span> SolidSystems<span class="op">::</span>CompositionalSolidPhase</span>
-<span id="cb3-9"><a href="#cb3-9" aria-hidden="true" tabindex="-1"></a> <span class="op"><</span>Scalar<span class="op">,</span> ComponentOne<span class="op">,</span> ComponentTwo<span class="op">>;</span></span>
-<span id="cb3-10"><a href="#cb3-10" aria-hidden="true" tabindex="-1"></a><span class="op">};</span></span></code></pre></div>
-</section></section>
-<section>
-<section id="exercise" class="title-slide slide level1">
-<h1>Exercise</h1>
-
-</section>
-<section id="tasks" class="slide level2">
-<h2><ins> Tasks: </ins></h2>
-<ol type="1">
-<li>Get familiar with the code</li>
-<li>2p model: Implement a new component (incompressible and
-compressible)</li>
-<li>2p2c model: Implement a new fluid system</li>
-<li>Change wettability of the porous medium</li>
-<li>Advanced: Use van Genuchten relationship with parameters: alpha =
-0.0037 and alphalense = 0.00045, n = 4.7 and nlense = 7.3</li>
-</ol>
-<p><strong>First step:</strong> Go to <a
-href="https://git.iws.uni-stuttgart.de/dumux-repositories/dumux-course/tree/master/exercises/exercise-fluidsystem"
-class="uri">https://git.iws.uni-stuttgart.de/dumux-repositories/dumux-course/tree/master/exercises/exercise-fluidsystem</a>
-and check out the README</p>
-</section></section>
- </div>
- </div>
-
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--
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