From 365cdff54367aa4c850a442a5f36eada8d6084b2 Mon Sep 17 00:00:00 2001
From: Martin Beck <martin.beck@iws.uni-stuttgart.de>
Date: Tue, 13 Oct 2015 11:35:03 +0200
Subject: [PATCH] [el2p] Introduced input files, increased simulation time
Tests now use input files instead of command line input.
Simulation time changed to the original setup with 1e6 s of initialisation and 1e6 s of injection. Reference files are adapted accordingly.
Name of the executable for both the parallel and the non-parallel test is now the same.
(reviewed by fetzer)
---
test/geomechanics/el2p/CMakeLists.txt | 10 +-
test/geomechanics/el2p/el2pproblem.hh | 63 ++-
test/geomechanics/el2p/test_el2p.cc | 116 ++---
test/geomechanics/el2p/test_el2p.input | 12 +
test/references/el2p-parallel-reference.vtu | 158 +++----
test/references/el2p-reference.vtu | 462 ++++++++++----------
6 files changed, 412 insertions(+), 409 deletions(-)
create mode 100644 test/geomechanics/el2p/test_el2p.input
diff --git a/test/geomechanics/el2p/CMakeLists.txt b/test/geomechanics/el2p/CMakeLists.txt
index 644f28b7fb..ac7e639bb5 100644
--- a/test/geomechanics/el2p/CMakeLists.txt
+++ b/test/geomechanics/el2p/CMakeLists.txt
@@ -4,16 +4,16 @@ add_dumux_test(test_el2p test_el2p test_el2p.cc
python ${CMAKE_SOURCE_DIR}/bin/runtest.py
--script fuzzy
--files ${CMAKE_SOURCE_DIR}/test/references/el2p-reference.vtu
- ${CMAKE_CURRENT_BINARY_DIR}/el2p-00003.vtu
- --command "${CMAKE_CURRENT_BINARY_DIR}/test_el2p ${CMAKE_CURRENT_SOURCE_DIR}/grids/test_el2p.dgf 100 200 100")
+ ${CMAKE_CURRENT_BINARY_DIR}/el2p-00048.vtu
+ --command "${CMAKE_CURRENT_BINARY_DIR}/test_el2p")
if(MPI_FOUND)
- add_dumux_test(test_el2p_parallel test_el2p_parallel test_el2p.cc
+ add_dumux_test(test_el2p_parallel test_el2p test_el2p.cc
python ${CMAKE_SOURCE_DIR}/bin/runtest.py
--script fuzzy
--files ${CMAKE_SOURCE_DIR}/test/references/el2p-parallel-reference.vtu
- ${CMAKE_CURRENT_BINARY_DIR}/s0004-p0001-el2p-00003.vtu
- --command "${MPIEXEC} -np 4 ${CMAKE_CURRENT_BINARY_DIR}/test_el2p_parallel ${CMAKE_CURRENT_SOURCE_DIR}/grids/test_el2p.dgf 100 200 100")
+ ${CMAKE_CURRENT_BINARY_DIR}/s0004-p0001-el2p-00048.vtu
+ --command "${MPIEXEC} -np 4 ${CMAKE_CURRENT_BINARY_DIR}/test_el2p")
endif()
#install sources
diff --git a/test/geomechanics/el2p/el2pproblem.hh b/test/geomechanics/el2p/el2pproblem.hh
index b1b1413caa..097a5bb920 100644
--- a/test/geomechanics/el2p/el2pproblem.hh
+++ b/test/geomechanics/el2p/el2pproblem.hh
@@ -180,6 +180,7 @@ class El2P_TestProblem : public ImplicitPorousMediaProblem<TypeTag>
typedef typename GET_PROP_TYPE(TypeTag, PrimaryVariables) PrimaryVariables;
typedef typename GET_PROP_TYPE(TypeTag, BoundaryTypes) BoundaryTypes;
+ typedef typename GET_PROP_TYPE(TypeTag, GridCreator) GridCreator;
typedef typename GET_PROP_TYPE(TypeTag, TimeManager) TimeManager;
typedef typename GridView::template Codim<0>::Entity Element;
@@ -196,6 +197,7 @@ class El2P_TestProblem : public ImplicitPorousMediaProblem<TypeTag>
typedef Dune::BlockVector<GlobalPosition> InitialStressField;
typedef typename GET_PROP_TYPE(TypeTag, LocalFEMSpace) LocalFEMSpace;
+ typedef typename GET_PROP_TYPE(TypeTag, PTAG(Problem)) Problem;
typedef typename GET_PROP_TYPE(TypeTag, CO2Table) CO2Table;
typedef Dumux::CO2<Scalar, CO2Table> CO2;
@@ -209,21 +211,19 @@ public:
* \param tInitEnd End of initialization period
*/
El2P_TestProblem(TimeManager &timeManager,
- const GridView &gridView,
- const Scalar tInitEnd)
+ const GridView &gridView)
: ParentType(timeManager, gridView),
- gridView_(gridView),
- vertexMapper_(gridView)
+ gridView_(gridView)
{
std::cout << "El2P_TestProblem: Initializing the fluid system for the el2p model\n";
// initialize the tables of the fluid system
- FluidSystem::init(/*Tmin=*/273,
- /*Tmax=*/400,
- /*nT=*/120,
- /*pmin=*/1e5,
- /*pmax=*/1e8,
- /*np=*/200);
+// FluidSystem::init(/*Tmin=*/273,
+// /*Tmax=*/400,
+// /*nT=*/120,
+// /*pmin=*/1e5,
+// /*pmax=*/1e8,
+// /*np=*/200);
// resize the pressure field vector with the number of vertices
pInit_.resize(gridView.size(dim));
@@ -239,10 +239,31 @@ public:
// (usually the coupling is switched off for the initialization run)
coupled_ = false;
// set initial episode length equal to length of initialization period
+ Scalar tInitEnd = GET_RUNTIME_PARAM(TypeTag, Scalar,TimeManager.TInitEnd);
this->timeManager().startNextEpisode(tInitEnd);
// transfer the episode index to spatial parameters
// (during intialization episode hydraulic different parameters might be applied)
this->spatialParams().setEpisode(this->timeManager().episodeIndex());
+
+ depthBOR_ = GET_RUNTIME_PARAM(TypeTag, Scalar, Injection.DepthBOR);
+ episodeLength_ = GET_RUNTIME_PARAM(TypeTag, Scalar, TimeManager.EpisodeLength);
+
+ dt_ = GET_RUNTIME_PARAM(TypeTag, Scalar, TimeManager.DtInitial);
+ }
+
+ void init()
+ {
+ if (this->timeManager().time() < 1e-8)
+ {
+ // set the initial approximated hydrostatic pressure distribution
+ // based on an averaged brine density
+ // or based on a pressure polynomial
+ this->initializePressure();
+ // output is written
+ this->setOutput(true);
+ }
+
+ ParentType::init();
}
// note: pInit is < 0 (just due to geomechanics sign convention applied here)
@@ -300,8 +321,7 @@ public:
VertexIterator vEndIt = gridView_.template end<dim>();
for(; vIt != vEndIt; ++vIt)
{
- int vIdxGlobal = vertexMapper_.index(*vIt);
- //
+ int vIdxGlobal = this->vertexMapper().index(*vIt);
pInit_[vIdxGlobal] = -this->model().curSol().base()[vIdxGlobal*2][0];
}
}
@@ -675,17 +695,28 @@ public:
void episodeEnd()
{
this->timeManager().startNextEpisode(episodeLength_);
+ // At the end of the initializationRun
+ if (this->timeManager().time() == GET_RUNTIME_PARAM(TypeTag, Scalar,TimeManager.TInitEnd))
+ {
+ this->timeManager().setTimeStepSize(dt_);
+
+ this->setCoupled(true);
+ // pressure field resulting from the initialization period is applied for the initial
+ // and the Dirichlet boundary conditions
+ this->setPressure();
+ // output is written
+ this->setOutput(true);
+ }
}
private:
static constexpr Scalar eps_ = 3e-6;
- static constexpr Scalar depthBOR_ = 2000;
+ Scalar depthBOR_;
static constexpr Scalar brineDensity_ = 1059;
- static constexpr Scalar episodeLength_ = 1e5;
+ Scalar episodeLength_;// = GET_RUNTIME_PARAM(TypeTag, Scalar, TimeManager.EpisodeLength);
std::vector<Scalar> pInit_;
GridView gridView_;
- VertexMapper vertexMapper_;
Scalar dt_;
public:
bool initializationRun_, coupled_, output_;
@@ -868,7 +899,7 @@ public:
private:
static constexpr Scalar eps_ = 3e-6;
- static constexpr Scalar depthBOR_ = 2000;
+ Scalar depthBOR_;
std::vector<Scalar> pInit_;
GridView gridView_;
VertexMapper vertexMapper_;
diff --git a/test/geomechanics/el2p/test_el2p.cc b/test/geomechanics/el2p/test_el2p.cc
index ccfa4e1102..cbf5f31128 100644
--- a/test/geomechanics/el2p/test_el2p.cc
+++ b/test/geomechanics/el2p/test_el2p.cc
@@ -26,90 +26,50 @@
#if HAVE_DUNE_PDELAB
#include <dune/common/precision.hh>
-#include <dumux/common/start.hh>
+#include <dune/common/version.hh>
#include "el2pproblem.hh"
+#include <dumux/common/start.hh>
-int main(int argc, char** argv) {
- try {
- typedef TTAG(El2P_TestProblem) TypeTag;
- typedef GET_PROP_TYPE(TypeTag, Grid) Grid;
- typedef GET_PROP_TYPE(TypeTag, Problem) Problem;
- typedef GET_PROP_TYPE(TypeTag, TimeManager) TimeManager;
- typedef Dune::GridPtr<Grid> GridPointer;
-
- // initialize MPI, finalize is done automatically on exit
- Dune::MPIHelper::instance(argc, argv);
-
- if (argc < 5) {
- std::cout<<"usage: "<<argv[0]<<" grid tEnd_Initialization tEnd dt "<<std::endl;
- return 1;
- }
-
- int argPos = 1;
- double tEnd(0), dt(0), tInitEnd(0);
-
- // get the grid name
- const char *dgfFileName = argv[argPos++];
- // get the end of the initialization period
- std::istringstream(argv[argPos++]) >> tInitEnd;
- // get the end of the real simulation period
- std::istringstream(argv[argPos++]) >> tEnd;
- // get the initial time step (applied for initialization and for real simulation)
- std::istringstream(argv[argPos++]) >> dt;
-
- // load the grid from file
- GridPointer gridPtr(dgfFileName);
- (*gridPtr).loadBalance();
-
- // Instantiate the time manager
- TimeManager timeManager;
-
- // instantiate problem
- Problem problem(timeManager, gridPtr->leafGridView(), tInitEnd);
-
- // set the initial approximated hydrostatic pressure distribution
- // based on an averaged brine density
- // or based on a pressure polynomial
- problem.initializePressure();
-
- // start initialization run to initialize the pressure field correctly
- timeManager.init(problem, 0.0, // initial time
- dt, // initial time step
- tInitEnd); // end of initialization period
- std::cout<<"tInit: "<<tInitEnd<<" tEnd: "<<tEnd<<" dt: "<<dt<<std::endl;
- timeManager.run();
-
- // for the real simulation the coupling between mass balances and momentum equation
- // is turned on
- problem.setCoupled(true);
- // pressure field resulting from the initialization period is applied for the initial
- // and the Dirichlet boundary conditions
- problem.setPressure();
- // output is written
- problem.setOutput(true);
- // run the real simulation
- timeManager.init(problem, tInitEnd, // initial time
- dt, // initial time step
- tEnd + tInitEnd); // final time
-
- timeManager.run();
-
- return 0;
- } catch (Dune::Exception &e) {
- std::cerr << "Dune reported error: " << e << std::endl;
- } catch (...) {
- std::cerr << "Unknown exception thrown!" << std::endl;
+/*!
+ * \brief Provides an interface for customizing error messages associated with
+ * reading in parameters.
+ *
+ * \param progName The name of the program, that was tried to be started.
+ * \param errorMsg The error message that was issued by the start function.
+ * Comprises the thing that went wrong and a general help message.
+ */
+void usage(const char *progName, const std::string &errorMsg)
+{
+ if (errorMsg.size() > 0) {
+ std::string errorMessageOut = "\nUsage: ";
+ errorMessageOut += progName;
+ errorMessageOut += " [options]\n";
+ errorMessageOut += errorMsg;
+ errorMessageOut += "\n\nThe list of mandatory options for this program is:\n"
+ "\t-TimeManager.TInitEnd End of the initialization [s] \n"
+ "\t-TimeManager.TEnd End of the simulation [s] \n"
+ "\t-TimeManager.DtInitial Initial timestep size [s] \n"
+ "\t-Grid.File Name of the file containing the grid \n"
+ "\t definition in DGF format\n"
+ "\t-Problem.Name String for naming of the output files \n"
+ "\n";
+
+ std::cout << errorMessageOut << std::endl;
}
}
+////////////////////////
+// the main function
+////////////////////////
+int main(int argc, char** argv)
+{
+ typedef TTAG(El2P_TestProblem) TypeTag;
+ return Dumux::start<TypeTag>(argc, argv, usage);
+}
+
+
#else // HAVE_DUNE_PDELAB
-#include <iostream>
+#warning You need to have dune-pdelab installed and patched to run this test.
-int main()
-{
-#warning You need to have dune-pdelab (>= 2.0) installed to run this test.
- std::cerr << "You need to have dune-pdelab (>= 2.0) installed to run this test.\n";
- return 77;
-}
#endif // HAVE_DUNE_PDELAB
diff --git a/test/geomechanics/el2p/test_el2p.input b/test/geomechanics/el2p/test_el2p.input
new file mode 100644
index 0000000000..fa06d1020b
--- /dev/null
+++ b/test/geomechanics/el2p/test_el2p.input
@@ -0,0 +1,12 @@
+[TimeManager]
+TInitEnd = 1e6 # [s]
+TEnd = 2e6 # [s]
+DtInitial = 10 # [s]
+EpisodeLength = 1e6 # [s]
+
+[Grid]
+File = ./grids/test_el2p.dgf
+Refine = 0
+
+[Injection]
+DepthBOR = 2000 # Depth at the bottom of the scenario [m]
diff --git a/test/references/el2p-parallel-reference.vtu b/test/references/el2p-parallel-reference.vtu
index 6db52d6f97..d6908630c5 100644
--- a/test/references/el2p-parallel-reference.vtu
+++ b/test/references/el2p-parallel-reference.vtu
@@ -11,118 +11,118 @@
313.15 313.15
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diff --git a/test/references/el2p-reference.vtu b/test/references/el2p-reference.vtu
index e2146dc974..d0a8aa0a5e 100644
--- a/test/references/el2p-reference.vtu
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--
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