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description of variables


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15511 2fb0f335-1f38-0410-981e-8018bf24f1b0

mistakenly commented in commit r15453.  Reviewed by kissinger


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15465 2fb0f335-1f38-0410-981e-8018bf24f1b0

The material folder is now complete: 
-All units have been "TeXed"  and added where missing
-All relevant function arguments are described in doxygen
-All doxygen warnings but one have been removed, also from the recently added fluidsystems

Work done by Simon, reviewed by Alex


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15453 2fb0f335-1f38-0410-981e-8018bf24f1b0

introduced setMassFraction() in the compositionalfluidstate.hh so that
in case of mass fraction formulation, they can be set directly, the
converting to mole fractions is now handled by the
compositionalfluidstate class

some test failed (kuevette with 5% difference), new references are
committed, however maybe some thresholds have to be adapted

reviewed by kissinger


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15433 2fb0f335-1f38-0410-981e-8018bf24f1b0

- added FluidState group, which appears now on the module page
- fixed ingroups


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15432 2fb0f335-1f38-0410-981e-8018bf24f1b0

- added doxygen comments and cleanup of defaultcomponents.hh
- improved documentation of constant.hh

[test]
- added units in test_navierstokes.input

reviewed by natalies



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15420 2fb0f335-1f38-0410-981e-8018bf24f1b0

Add required properties and their defaults.
[fix] Parameter in the ni electrochemistry
[cleanup] Adjust class names to naming conventions

Reviewed by bernd



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15403 2fb0f335-1f38-0410-981e-8018bf24f1b0

- added "constant" component which reads its properties from the input file
- updated documention for the "unit" component
- updated test_navierstokes which now uses the "constant" component

reviewed by bernd


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15395 2fb0f335-1f38-0410-981e-8018bf24f1b0

- All headers and source files are moved to the specfied include directory during installation.

- Existing CMakeLists.txt files were appended.
- CMakeLists.txt were added in folders that did not contain any CMakeLists.txt files but contain headers
- The installed version of dumux has been tested by Bernd with the dumux-lecture module

Reviewed, modified and tested by Bernd.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15347 2fb0f335-1f38-0410-981e-8018bf24f1b0

* Remove trailing whitespace and tabs
* Move electrochemistry output to the test problem (not related to 2pnc in general)
* Make electrochemistry have static members
* Use naming conventions for indices in the model
* Try to make the model work with cellcentered too (No cell-centered test available so far)
* Make electrochemistry input parameters part of a group "ElectroChemistry"
* Make the electrochemistry model a named enum (ElectroChemistryModel)for readability

Reviewed by martins 



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15298 2fb0f335-1f38-0410-981e-8018bf24f1b0

- BuildBot failed for commit -r 15292. The possible reason was the usage of static const int as template parameter for electrochemistry. (checked with M.Schneider)
- Unused variable removed from h2on2o2fluidsystem.hh 
- Unnecessary headers removed from test_box2pnc.cc 

Reviewed by (M.Schneider)

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15296 2fb0f335-1f38-0410-981e-8018bf24f1b0

- The required binary coefficients are added.
- Electrochemistry equations added for both isothermal and non-isothermal cases (Non-isothermal are not used till now).
- pc-s relation for hydrophobic material  added
- h2ON2o2 fluid system added
- fuelcell test case is the new test problem for 2pnc model.

Moreover, some updated related to 2pncmin model are included

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15292 2fb0f335-1f38-0410-981e-8018bf24f1b0

- adaption to style of other models (replaced use of \nabla by use of div or grad)
- replaced use of mass fraction with mole fraction in diffusion term and added
  comment about use of binary diffusion
- fixed typos

[doxygen,material]
- fixed typos and line break



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15207 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Units in the fluidsystem/brinevariablesalinity and components/nacl checked. Additional commented units removed.
- Commented cout statements removed from computefromfugacities2pncmin, computefromreferencephase2pnc and miscible2pnccomposition
- The ccommented out removed from problem file and input file corrected.
- The test case is checked for both debug and optim model with clang compiler.

   

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15203 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15202 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15198 2fb0f335-1f38-0410-981e-8018bf24f1b0

To follow the naming concenvention "brine_varSalinity" is moved to "brineversalinity". Moreover, a missing binary coefficient file brine_air is added (Reviewed by Johannes).

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15197 2fb0f335-1f38-0410-981e-8018bf24f1b0

New test case for 2pncmin model added to dumux/test. For this following additional files are needed (Reviewde by Johannes)

- For variation of salinity in brine the needed constitutive relations are implemented in components brine_VerSalinity.hh and nacl.hh
- Additional constraint solvers (compositionfromfugacities2pncmin and computefromreferencephase2pncmin) are needed, specially for the case nPhaseOnly
- Additional constraint solvers (computefromreferencephase2pnc and miscible2pnccomposition) are needed for 2pnc cases in general.
- Fluidsystem brineairfluidsystem is updated
- Binerycoefficient file for brine_air case is included. 

- A test case for 2pncmin model is included for flusiong of precipitated salt in gas reserviors. The includes corresponding problem file, spatial parameters file, input file and *.cc file.
- For this the CMakeLists.txt is also updated.
- A reference solution 2pncmin test case "injectionbox2pncmin-reference" is included to test/references folder

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15196 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15138 2fb0f335-1f38-0410-981e-8018bf24f1b0

readded empty default constructor which is needed for the co2tables.inc

reviewed by gruenich


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15064 2fb0f335-1f38-0410-981e-8018bf24f1b0

- remove trailing whitespace
- replace tabs by spaces
- remove pointless returns
- remove superfluous semicolons
(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15056 2fb0f335-1f38-0410-981e-8018bf24f1b0

- enthalpy function in the h2oairfs now use the given phaseIdx and not
automatically the nPhaseIdx, this could affect local-non-equilibrium
results
- fixed one description and one unit given

reviewed by nicolas


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15048 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15047 2fb0f335-1f38-0410-981e-8018bf24f1b0

removed unused variable warning

reviewed by nicolas


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15040 2fb0f335-1f38-0410-981e-8018bf24f1b0

fixed warnings from doxygen

[plotthermalconductivitymodel]
deprecated the old class constructor call

reviewed by nicolas


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15029 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@15004 2fb0f335-1f38-0410-981e-8018bf24f1b0

Remove deprecated, Autotools-based build system.
Use CMake-based one instead.
(reviewed by bernd)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14939 2fb0f335-1f38-0410-981e-8018bf24f1b0

Reviewed by Thomas


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14837 2fb0f335-1f38-0410-981e-8018bf24f1b0

fixed call of thermalconductivity plot (initializing with pressure and
temperature) without deprecation

[material]
unified output for out-of-range messages in h2o component

reviewed by gruenich


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14831 2fb0f335-1f38-0410-981e-8018bf24f1b0

values).

Reviewed by Martin S.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14820 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Rename mainpage, modules and parameterlist to *.txt
  to work around new behavior in Doxygen 1.8.8 or newer.
- Fix missing closing brackets in brine_co2.hh.
- Add missing ! in plotoverline (by fetzer)
(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14763 2fb0f335-1f38-0410-981e-8018bf24f1b0

- binarycoefficients
- constraintsolver
- eos

- Units were added where required
- All units were checked that they are expressed in latex
- No additional doxygen errors or wanrings

Work done by Scholz
Reviewed and committed by Alexk

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14706 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14665 2fb0f335-1f38-0410-981e-8018bf24f1b0

added a new thermal conductivity law (Johansen), with a better fit to
experimental data for lower water saturation

reviewed by martinb



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14548 2fb0f335-1f38-0410-981e-8018bf24f1b0

Reviewed by Thomas

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14469 2fb0f335-1f38-0410-981e-8018bf24f1b0

Added files for plotting the material laws. Added functionality to plot
files and functions in gnuplot, too. Two different examples how to use
the interface are added.
1) plot material laws like, pc-Sw, kr-Sw, D_eff-Sw, \lambda-Sw, etc:
   see test/implicit/2p2c/test/implicit/2p2c/waterairspatialparams.hh
2) live output of results:
   see test/multidomain/2cnistokes2p2cni/2p2cnisubproblem.hh

Test for the material plot functions will be introduced after the
release.

reviewed by gruenich




git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14458 2fb0f335-1f38-0410-981e-8018bf24f1b0

adapted templates in diffusivityconstanttau.hh, which wasn't used
anyway.
added rhoSolid to the thermalconductivitylaws.
updated some comments and GNU licence.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14430 2fb0f335-1f38-0410-981e-8018bf24f1b0

by doxygen.
- One more small change in a unit in co2.hh.


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14370 2fb0f335-1f38-0410-981e-8018bf24f1b0

Reviewed by Alex

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14369 2fb0f335-1f38-0410-981e-8018bf24f1b0

In some places, property retrievals of the form
GET_PROP...(TypeTag, PTAG(...))
can still be found. The use of PTAG is not required for a very long time
already. This patch replaces such calls by
GET_PROP...(TypeTag, ...)

Reviewed by gruenich.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14240 2fb0f335-1f38-0410-981e-8018bf24f1b0