Similar for ElementLayout.
(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14111 2fb0f335-1f38-0410-981e-8018bf24f1b0

All implicit porous-media models except 2pdfm are now able to run on
grids with dim < dimWorld. This still required some replacements of dim
by dimWorld, for example, in the velocity output of all models. In
implicit/1p, four new tests are added that run the 1p test problem on
1d-2d and 1d-3d Alberta grids with box and cell-centered, respectively.
Compilation has been tested also for all other models, but no runtime
testing has been performed.

This completes FS#183. Based upon preliminary work and a patch by
Natalie, thank you.

Reviewed by Natalie.


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14110 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14105 2fb0f335-1f38-0410-981e-8018bf24f1b0

and the forgotten update of the reference solutions



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14104 2fb0f335-1f38-0410-981e-8018bf24f1b0

- removed Beavers-Joseph dependency for the handling of the
couplingInflow and couplingOutflow boundaries
- removed todo and unused lines of code
- updated reference solutions for the multidomain problem (only small
deviations from reference)

reviewed by gruenich, bernd



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14102 2fb0f335-1f38-0410-981e-8018bf24f1b0

fixed issue, that the diffusive enthalpy fluxes have been treated
differently inside the stokes domain than at the coupling interface

reviewed by bernd



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14101 2fb0f335-1f38-0410-981e-8018bf24f1b0

fixed inconsistent use of the boundaryLayerOffset for the
boundary layer models

reviewed by gruenich



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14099 2fb0f335-1f38-0410-981e-8018bf24f1b0

replaced the boundary condition functions with the respective "atPos"
functions (Dumux day task)
introduced a "atPos" function for the Beavers-Jospeh Coefficient
applied naming convention to the bBox variables

reviewed by gruenich



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14096 2fb0f335-1f38-0410-981e-8018bf24f1b0

cleaned up the stokes-darcy models:
  - SET_TYPE_PROP task from Dumux Day
  - cleaned up input
  - removed commented lines of code
  - removed try/catch blocks

updated the coupled-freeflow reference results which was broken in one
of the previous commits

reviewed by gruenich



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14094 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer and bernd,
thanks to pnuske for answering my question)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14088 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by natalies)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14086 2fb0f335-1f38-0410-981e-8018bf24f1b0

Before, velocity output only worked for cubes. This generalizes it to
simplices (box and cc) and prisms/pyramids (box only). Implements
FS#248.

Some reference solutions are adpated due to an improved boundary
condition handling for cell centered.

Reviewed by Alex.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14085 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14084 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14080 2fb0f335-1f38-0410-981e-8018bf24f1b0

Relsize is not part of standard TeX live and causes errors.
Use the command suggested from the C++ FAQ.


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14078 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by gruenich)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14076 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14073 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14071 2fb0f335-1f38-0410-981e-8018bf24f1b0

This implements FS#216.

The "heatCapacity" function of the spatial parameters and the volume
variables for the implicit nonisothermal models was a misnomer, since it
returned an effective quantity, namely, 
heatCapacity*density*(1 - porosity) in [J/(K m^3)].
Except for mpnc, which resulted in an additional inconsistency.

Corresponding to the decision documented in FS#216, this patch renames
the function to "solidHeatCapacity" and returns always the "true"
(non-effective) heat capacity in [J/(kg K)]. This requires an additional
function "solidDensity" which returns the mass density of the porous
matrix. Moreover, the functions "thermalConductivitySolid/Fluid" are
renamed to "solid/fluidThermalConductivity". The decision to prepend
with "solid/fluid" rather than to append is motivated by consistency
with components and fluid systems, where "gas" and "liquid" are always
prepended to the corresponding function names.

_Beware_: this change breaks compatibility. You have to adapt your
spatial parameters such that they offer functions "solidHeatCapacity",
"solidDensity" and "solidThermalConductivity".

Reviewed by Alex.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14070 2fb0f335-1f38-0410-981e-8018bf24f1b0

changes in implicit velocity output: works now also with branched grids and withgrids where dim != dimworld

reviewed by Bernd



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14065 2fb0f335-1f38-0410-981e-8018bf24f1b0

deleted

The script should be run and acted upon before every release. This has
been added to the release manager's tasks.

Reviewed by Thomas.



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14063 2fb0f335-1f38-0410-981e-8018bf24f1b0

Fix headercheck for this header.
(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14057 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Forgot to mention: Reviewed by Thomas Fetzer



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14055 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Included tests richardsniconduction and convection test for box and cc
- Fixed unit of thermalconductivitySolid() in all spatial parameters in the test folder from W/m^2 to W/(m K)

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14054 2fb0f335-1f38-0410-981e-8018bf24f1b0

- deleted all unnecessary comments
- deleted all ################-only lines


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14049 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by gruenich)

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14047 2fb0f335-1f38-0410-981e-8018bf24f1b0

This implements the task of the last dumux day for the implicit tests (common/decoupled/freeflow/geomechanics see earlier commit):
In test folder:
1. change SET_TYPE_PROP instead of SET_PROP where possible
2. Remove commented code where not needed
3. Remove unnecessary includes
4. Change the neumann/dirichlet,... functions to the corresponding atPos functions where globalPos is needed

The task for the multidomain folder will follow by thomas

Reviewed by bernd
 


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14046 2fb0f335-1f38-0410-981e-8018bf24f1b0

introduced proporties and propertydefaults for the coupled stokes-darcy
models, that the model does not have to use runtime parameters.
properties from the test problem headers have been moved to the model
properties.

reviewed by gruenich



git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14045 2fb0f335-1f38-0410-981e-8018bf24f1b0

Fixes the issue that elementMapper cannot be updated from the problem file needed for adaptive grid methods. The functions returning the elementMapper and vertexMapper are now overloaded with a non constant version of the functions. Reviewed by Bernd.

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14040 2fb0f335-1f38-0410-981e-8018bf24f1b0

Remove a wrong comment.
(reviewed by bernd)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14036 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Don't print # lines around status messages, similar to FS#247
- use std::endl instead of \n
- Removed dead code
- use auto

(reviewed by bernd)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14035 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@14021 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13987 2fb0f335-1f38-0410-981e-8018bf24f1b0

(reviewed and tested by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13973 2fb0f335-1f38-0410-981e-8018bf24f1b0

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13970 2fb0f335-1f38-0410-981e-8018bf24f1b0

Replace tabs by spaces.


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13948 2fb0f335-1f38-0410-981e-8018bf24f1b0

The struct is already provided by dune-grid.
Remove wrong semicolons after methods.
(reviewed and tested (thanks!) by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13945 2fb0f335-1f38-0410-981e-8018bf24f1b0

- Changed the call for entity maps from mapper.map() to mapper.index() or mapper.subIndex() if dune >= 2.4 is used
- included <dune/common/version.hh> in the files

Reviewed by Christoph

git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13927 2fb0f335-1f38-0410-981e-8018bf24f1b0

The method is deprecated in 2.4.
Reduce deprecation warnings for implicit methods, more
replacements have to follow.
(reviewed by fetzer)


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13909 2fb0f335-1f38-0410-981e-8018bf24f1b0

Adjust runTest.sh to pass-through the return code.
Adapt tests in test/decoupled/2p2c to reflect this behaviour.


git-svn-id: svn://svn.iws.uni-stuttgart.de/DUMUX/dumux/trunk@13897 2fb0f335-1f38-0410-981e-8018bf24f1b0