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[gridgeometry][bugfix] Reinitialize maps in update

Timo Koch requested to merge fix/staggered-gridgemeotry-issue-1079 into master

If update is called twice the connectivity map is wrong sinnce we push additional entries in there, i.e. each node in the stencil will appear twice.

This makes sure all vectors are correctly reinitalized in every update

Edited by Timo Koch

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