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Cleanup/parameters for 3.8

Ivan Buntic requested to merge cleanup/parameters-for-3.8 into master

What this MR does / why does DuMux need it:

With this merge request all non-recorded parameters read in from input parameter files should be addresses in doc/doxygen/extradoc/parameters.json.

Before you request a review from someone, make sure to revise the following points:

Edited by Ivan Buntic

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