[cleanup] updated .gitignore and removed .Rhistory from uqBenchmarkData directory.

.gitignore

+.Rhistory
+.spyproject/
 BayesValidRox/.spyderproject/
-tests/BeamTest/Polynomials/
-tests/BeamTest/surrogateBeam/*.zip
-tests/BraninTest/Polynomials/*.npy
-BayesInference/__pycache__/BayesInference.cpython-37.pyc
-BayesInference/__pycache__/Discrepancy.cpython-37.pyc
-BayesInference/__pycache__/__init__.cpython-37.pyc
-PostProcessing/__pycache__/PostProcessing.cpython-37.pyc
-PostProcessing/__pycache__/__init__.cpython-37.pyc
-PyLink/__pycache__/FuncForwardModel.cpython-37.pyc
-PyLink/__pycache__/PyLinkForwardModel.cpython-37.pyc
-PyLink/__pycache__/__init__.cpython-37.pyc
-surrogate_models/__pycache__/ExpDesigns.cpython-37.pyc
-surrogate_models/__pycache__/Exploration.cpython-37.pyc
-surrogate_models/__pycache__/Input.cpython-37.pyc
-surrogate_models/__pycache__/Voronoi.cpython-37.pyc
-surrogate_models/__pycache__/__init__.cpython-37.pyc
-surrogate_models/__pycache__/aPoly_Construction.cpython-37.pyc
-surrogate_models/__pycache__/surrogate_models.cpython-37.pyc
-tests/AnalyticalFunction/AnalyticFunc_Results.pkl
-tests/AnalyticalFunction/Outputs_Bayes_Calib/
-tests/AnalyticalFunction/Outputs_PostPorecessing/
-tests/AnalyticalFunction/Outputs_demo/
-tests/AnalyticalFunction/Outputs_sequential_BayesOptDesign/
-tests/AnalyticalFunction/Polynomials/
-tests/AnalyticalFunction/__pycache__/
-tests/BeamTest/Beam_Results.pkl
-tests/BeamTest/Polynomials/Roots_degree7_Pa1.npy
-tests/BeamTest/Polynomials/Roots_degree7_Pa2.npy
-tests/BeamTest/Polynomials/Roots_degree7_Pa3.npy
-tests/BeamTest/Polynomials/Roots_degree7_Pa4.npy
-tests/BeamTest/__pycache__/read_Beam_Deflection.cpython-37.pyc
-tests/BeamTest/surrogateBeam/Outputs_PostPorecessing/
-tests/BeamTest/surrogateBeam/Polynomials/
-tests/BeamTest/surrogateBeam/__pycache__/read_Beam_Deflection.cpython-37.pyc
-tests/BraninTest/Branin_Results.pkl
-tests/BraninTest/Outputs_Bayes_Calib/
-tests/BraninTest/Outputs_PostPorecessing/
-tests/BraninTest/Outputs_SeqPosteriorComparison/
-tests/BraninTest/Outputs_normal_BayesOptDesign/
-tests/BraninTest/Outputs_sequential_BayesOptDesign/
-tests/BraninTest/Outputs_sequential_dual annealing/
-tests/BraninTest/__pycache__/Branin.cpython-37.pyc
-tests/Co2BenchmarkTest/CollocationPoints.npy
-tests/Co2BenchmarkTest/ExpDesign_Y.npy
-tests/Co2BenchmarkTest/Results/
-tests/IshigamiTest/Outputs_PostPorecessing/
-tests/IshigamiTest/Polynomials/
-tests/MECBM/.model_exe_orig.sh.swp
-tests/MECBM/SurrogateModel/MECBM.zip
-tests/MECBM/SurrogateModel/MECBMValid.zip
-tests/MECBM/SurrogateModel/MECBM_SA_Results.pkl
-tests/MECBM/SurrogateModel/NormalDesign_100/
-tests/MECBM/SurrogateModel/SeqDesign_25_100/
-tests/MECBM/SurrogateModel/SeqDesign_25_100_APP/
-tests/MECBM/SurrogateModel/SeqDesign_25_100_DPP/
-tests/MECBM/SurrogateModel/SeqDesign_25_150_DKL/
-tests/MECBM/SurrogateModel/__pycache__/read_MECBM.cpython-37.pyc
-tests/MECBM/model_exe_orig.sh
-tests/Fetzer/Outputs_*
-BayesValidRox/BayesInference/__pycache__/Discrepancy.cpython-36.pyc
-BayesValidRox/surrogate_models/__pycache__/Exploration.cpython-36.pyc
-BayesValidRox/tests/AnalyticalFunction/AnalyticFunc_Results.pkl
-BayesValidRox/tests/AnalyticalFunction/Outputs_Bayes_Calib/
-BayesValidRox/tests/AnalyticalFunction/Outputs_PostPorecessing/
-BayesValidRox/tests/AnalyticalFunction/Outputs_sequential_BayesOptDesign/
-BayesValidRox/tests/AnalyticalFunction/Outputs_sequential_alphabetic/
-BayesValidRox/tests/AnalyticalFunction/Polynomials/
-BayesValidRox/tests/AnalyticalFunction/__pycache__/
-BayesValidRox/BayesInference/__pycache__/BayesInference.cpython-37.pyc
-BayesValidRox/BayesInference/__pycache__/Discrepancy.cpython-37.pyc
-BayesValidRox/BayesInference/__pycache__/__init__.cpython-37.pyc
-BayesValidRox/PostProcessing/__pycache__/PostProcessing.cpython-37.pyc
-BayesValidRox/PostProcessing/__pycache__/__init__.cpython-37.pyc
-BayesValidRox/PyLink/__pycache__/FuncForwardModel.cpython-37.pyc
-BayesValidRox/PyLink/__pycache__/PyLinkForwardModel.cpython-37.pyc
-BayesValidRox/PyLink/__pycache__/__init__.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/ExpDesigns.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/Exploration.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/Input.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/Voronoi.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/__init__.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/aPoly_Construction.cpython-37.pyc
-BayesValidRox/surrogate_models/__pycache__/surrogate_models.cpython-37.pyc
-BayesValidRox/tests/AnalyticalFunction/Outputs_demo/
-BayesValidRox/tests/BeamTest/Beam_Results.pkl
-BayesValidRox/tests/BeamTest/Polynomials/Roots_degree7_Pa1.npy
-BayesValidRox/tests/BeamTest/Polynomials/Roots_degree7_Pa2.npy
-BayesValidRox/tests/BeamTest/Polynomials/Roots_degree7_Pa3.npy
-BayesValidRox/tests/BeamTest/Polynomials/Roots_degree7_Pa4.npy
-BayesValidRox/tests/BeamTest/__pycache__/read_Beam_Deflection.cpython-37.pyc
-BayesValidRox/tests/BeamTest/surrogateBeam/Outputs_PostPorecessing/
-BayesValidRox/tests/BeamTest/surrogateBeam/Polynomials/
-BayesValidRox/tests/BeamTest/surrogateBeam/__pycache__/read_Beam_Deflection.cpython-37.pyc
-BayesValidRox/tests/BraninTest/Branin_Results.pkl
-BayesValidRox/tests/BraninTest/Outputs_Bayes_Calib/
-BayesValidRox/tests/BraninTest/Outputs_PostPorecessing/
-BayesValidRox/tests/BraninTest/Outputs_SeqPosteriorComparison/
-BayesValidRox/tests/BraninTest/Outputs_normal_BayesOptDesign/
-BayesValidRox/tests/BraninTest/Outputs_sequential_BayesOptDesign/
-BayesValidRox/tests/BraninTest/Outputs_sequential_dual annealing/
-BayesValidRox/tests/BraninTest/__pycache__/Branin.cpython-37.pyc
-BayesValidRox/tests/Co2BenchmarkTest/CollocationPoints.npy
-BayesValidRox/tests/Co2BenchmarkTest/ExpDesign_Y.npy
+
+# BayesInference
+BayesValidRox/BayesInference/__pycache__/*
+
+# PostProcessing
+BayesValidRox/PostProcessing/__pycache__/*
+
+# PyLink
+BayesValidRox/PyLink/__pycache__/*
+
+# surrogate_models
+BayesValidRox/surrogate_models/__pycache__/*
+
+# AnalyticalFunction
+BayesValidRox/tests/AnalyticalFunction/*.pkl
+BayesValidRox/tests/AnalyticalFunction/Outputs_*
+BayesValidRox/tests/AnalyticalFunction/__pycache__/*
+
+# BeamTest
+BayesValidRox/tests/BeamTest/__pycache__/*
+BayesValidRox/tests/BeamTest/Outputs_*
+BayesValidRox/tests/BeamTest/*.zip
+BayesValidRox/tests/BeamTest/*.npy
+BayesValidRox/tests/BeamTest/*.pkl
+BayesValidRox/tests/BeamTest/surrogateBeam/*.zip
+BayesValidRox/tests/BeamTest/surrogateBeam/Outputs_*
+BayesValidRox/tests/BeamTest/surrogateBeam/__pycache__/*
+BayesValidRox/tests/BeamTest/surrogateBeam/*.pkl
+
+# BraninTest
+BayesValidRox/tests/BraninTest/*.pkl
+BayesValidRox/tests/BraninTest/Outputs_*
+BayesValidRox/tests/BraninTest/__pycache__/*
+BayesValidRox/tests/BraninTest/*.npy
+
+# Co2BenchmarkTest
+BayesValidRox/tests/Co2BenchmarkTest/__pycache__/*
+BayesValidRox/tests/Co2BenchmarkTest/*.zip
+BayesValidRox/tests/Co2BenchmarkTest/CO2Benchmark_*
+BayesValidRox/tests/Co2BenchmarkTest/Outputs_*
+BayesValidRox/tests/Co2BenchmarkTest/*.npy
 BayesValidRox/tests/Co2BenchmarkTest/Results/
-"BayesValidRox/tests/Co2BenchmarkTest/uqBenchmarkData/K\303\266ppel2019_Article_ComparisonOfData-drivenUncerta.pdf"
 BayesValidRox/tests/Co2BenchmarkTest/uqBenchmarkData/mc_10.zip
-BayesValidRox/tests/IshigamiTest/Outputs_PostPorecessing/
-BayesValidRox/tests/IshigamiTest/Polynomials/
-BayesValidRox/tests/MECBM/.model_exe_orig.sh.swp
-BayesValidRox/tests/MECBM/SurrogateModel/MECBM.zip
-BayesValidRox/tests/MECBM/SurrogateModel/MECBMValid.zip
-BayesValidRox/tests/MECBM/SurrogateModel/MECBM_SA_Results.pkl
-BayesValidRox/tests/MECBM/SurrogateModel/NormalDesign_100/
-BayesValidRox/tests/MECBM/SurrogateModel/SeqDesign_25_100/
-BayesValidRox/tests/MECBM/SurrogateModel/SeqDesign_25_100_APP/
-BayesValidRox/tests/MECBM/SurrogateModel/SeqDesign_25_100_DPP/
-BayesValidRox/tests/MECBM/SurrogateModel/SeqDesign_25_150_DKL/
-BayesValidRox/tests/MECBM/SurrogateModel/__pycache__/read_MECBM.cpython-37.pyc
+BayesValidRox/tests/Co2BenchmarkTest/uqBenchmarkData/*.pdf
+BayesValidRox/tests/Co2BenchmarkTest/uqBenchmarkData/PosteriorGeneration/*
+
+# Fetzer
+BayesValidRox/tests/Fetzer/*.pkl
+BayesValidRox/tests/Fetzer/Outputs_*
+BayesValidRox/tests/Fetzer/__pycache__/*
+BayesValidRox/tests/Fetzer/*.zip
+
+# IshigamiTest
+BayesValidRox/tests/IshigamiTest/Outputs_*
+BayesValidRox/tests/IshigamiTest/__pycache__/*
+BayesValidRox/tests/IshigamiTest/*.pkl
+BayesValidRox/tests/IshigamiTest/*.npy
+
+# MECBM
 BayesValidRox/tests/MECBM/model_exe_orig.sh
+BayesValidRox/tests/MECBM/.model_exe_orig.sh.swp
+BayesValidRox/tests/MECBM/__pycache__/*
+
+BayesValidRox/tests/MECBM/SurrogateModel/*.zip
+BayesValidRox/tests/MECBM/SurrogateModel/MECBM_*
+BayesValidRox/tests/MECBM/SurrogateModel/Outputs_*
+BayesValidRox/tests/MECBM/SurrogateModel/*.npy
+BayesValidRox/tests/MECBM/SurrogateModel/*.pkl
+BayesValidRox/tests/MECBM/SurrogateModel/__pycache__/*
+
+# PollutionTest
+BayesValidRox/tests/PollutionTest/__pycache__/*
+BayesValidRox/tests/PollutionTest/Outputs_*
+BayesValidRox/tests/PollutionTest/*.npy
+BayesValidRox/tests/PollutionTest/*.pkl