Started Changelog

CHANGELOG.md

+# CHANGELOG
+
+## [Unreleased]
+### Requirements
+* numpy now at 1.23.3
+* ....
+
+### Added
+* PyLinkForwardModel has new link_type 'umbridge' for UM-Bridge type models
+* class `InputSpace` as parent class to `ExpDesigns`
+* `MetaModel` has option to train with OLs+constraints, this is toggled by `MetaModel.apply_constraints`
+
+* Example `umbridge_tsunamitutorial` to show two options of using UM-Bridge type models
+* Example `convergence_tests` for the constraints
+
+### Changed
+* `MetaModelEngine` renamed to `Engine`
+* Function `hellinger_distance()` moved out of `MetaModelEngine`
+* Function `logpdf()` moved out of `MetaModelEngine`
+* Function `subdomain()` moved out of `MetaModelEngine`
+* Renamed `MetaModelEngine.run` and split into `Engine.train_normal` and `Engine.train_sequential`
+* `MetaModelEngine.opt_SeqDesign()` renamed to `Engine.choose_next_sample()`
+* `Engine.eval_metamodel()` equivalent to previous `MetaModel.eval_metamodel()`
+
+* `MetaModel` constructor does not receive the model
+* `MetaModel` fully independent of model
+* `MetaModel.add_ExpDesign()` repurposed for the new `InputSpace` class and renamed to `MetaModel.addInputSpace()`
+* `MetaModel.create_metamodel()` split into `MetaModel.build_metamodel()` and `MetaModel.fit()`
+* `MetaModel.fit()` renamed to `MetaModel.regression()`
+* `MetaModel.eval_metamodel()` only runs on given samples, option to give number of wanted evaluations removed
+* Function `compute_pce_moments()` moved from `MetaModelEngine` to `MetaModel`
+* Function `generate_polynomials()` moved from `ExpDesigns` to `MetaModel` 
+
+* Read-in of MC-references performed by `PyLinkForwardModel.read_observation()`, formerly in function `PyLinkForwardModel.read_mc_reference()`
+
+* `ExpDesigns` now independent of `MetaModel`
+* Parameters related to sequential training were moved from `MetaModel` to `ExpDesigns` (`Seq*`, `valid_model_runs`)
+* Use `ExpDesigns.Y` instead of `MetaModel.ModelOutputDict`
+
+* Constructors of `PostProcessing`, `BayesInference`, `BayesModelComp` are to be given the engine instead of the metamodel
+* Constructor of `Exploration` to be given `ExpDesigns` instead of `MetaModel`
+
+* `within_change()` moved out of `PyLinkForwardModel`
+
+* Examples updated to these changes
+ 
+### Removed
+* Class `SequentialDesign`
+* `ExpDesigns.method` 
+* `MetaModel.create_basis_indices()`
+
+

examples/beam/example_beam.py

@@ -128,7 +128,6 @@ if __name__ == "__main__":
     ExpDesign = ExpDesigns(Inputs)
 
     # One-shot (normal) or Sequential Adaptive (sequential) Design
-    ExpDesign.method = 'normal'
     ExpDesign.n_init_samples = 100
 
     # Sampling methods

examples/ishigami/example_ishigami.py

@@ -116,7 +116,6 @@ if __name__ == "__main__":
     ExpDesign = ExpDesigns(Inputs)
 
     # One-shot (normal) or Sequential Adaptive (sequential) Design
-    ExpDesign.method = 'normal'
     ExpDesign.n_init_samples = 50
 
     # Sampling methods

examples/model-comparison/example_model_comparison.py

@@ -178,7 +178,6 @@ if __name__ == "__main__":
     L2_ExpDesign = ExpDesigns(L2_Inputs)
 
     # One-shot (normal) or Sequential Adaptive (sequential) Design
-    L2_ExpDesign.method = 'normal'
     L2_ExpDesign.n_init_samples = 100
 
     # Sampling methods