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Commit bc8c5e78 authored by Ivan Buntic's avatar Ivan Buntic
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[slides][problem] Add file paths for code blocks.

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......@@ -102,6 +102,8 @@ struct Injection2pCC { using InheritsFrom = std::tuple<TwoP, CCTpfaModel>; };
} // end namespace Dumux::Properties::TTag
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/properties2p.hh`</span>
##
......@@ -116,6 +118,7 @@ struct Grid<TypeTag, TTag::Injection2pCC>
} // end namespace Dumux::Properties
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/properties2p.hh`</span>
##
......@@ -130,6 +133,7 @@ struct Problem<TypeTag, TTag::Injection2pCC>
} // end namespace Dumux::Properties
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/properties2p.hh`</span>
The problem class `InjectionProblem2P` is discussed
in one of the following sections.
......@@ -153,6 +157,7 @@ struct SpatialParams<TypeTag, TTag::Injection2pCC>
} // end namespace Dumux::Properties
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/properties2p.hh`</span>
##
......@@ -172,6 +177,7 @@ struct FluidSystem<TypeTag, TTag::Injection2pCC>
} // end namespace Dumux::Properties
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/properties2p.hh`</span>
# Problem definition
......@@ -191,6 +197,7 @@ class InjectionProblem2P : public PorousMediumFlowProblem<TypeTag>
// - scenario name (for output)
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
Inherit from base class `PorousMediumFlowProblem`, only override
scenario-specific functions (static polymorphism).
......@@ -212,7 +219,7 @@ BoundaryTypes boundaryTypesAtPos(const GlobalPosition &globalPos) const
return bcTypes;
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
##
......@@ -222,6 +229,7 @@ Dirichlet boundary condition values (only called on Dirichlet boundaries)
PrimaryVariables dirichletAtPos(const GlobalPosition& globalPos) const
{ return initialAtPos(globalPos); }
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
`PrimaryVariables` is an array of primary variables (here, the size of the array is 2).
......@@ -235,6 +243,7 @@ PrimaryVariables dirichlet(const Element &element,
...
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/dumux/common/fvproblem.hh`</span>
```cpp
PrimaryVariables dirichlet(const Element &element,
const SubControlVolume &scv) const
......@@ -242,6 +251,7 @@ PrimaryVariables dirichlet(const Element &element,
...
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/dumux/common/fvproblem.hh`</span>
##
......@@ -260,6 +270,7 @@ NumEqVector neumannAtPos(const GlobalPosition& globalPos) const
return values;
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
`NumEqVector` is an array of equations (here, the size of the array is 2).
......@@ -278,6 +289,8 @@ NumEqVector neumann(const Element& element,
...
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/dumux/common/fvproblem.hh`</span>
##
Initial conditions:
......@@ -296,6 +309,7 @@ PrimaryVariables initialAtPos(const GlobalPosition& globalPos) const
return values;
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
##
......@@ -306,6 +320,7 @@ Source/sink terms:
NumEqVector sourceAtPos(const GlobalPosition &globalPos) const
{ return NumEqVector(0.0); }
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pproblem.hh`</span>
##
......@@ -321,6 +336,7 @@ NumEqVector source(const Element &element,
...
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/dumux/common/fvproblem.hh`</span>
# Spatial Parameters definition
......@@ -339,6 +355,7 @@ class InjectionSpatialParams
// e.g. porosity, permeability
};
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pspatialparams.hh`</span>
Inherit from `FVPorousMediumFlowSpatialParamsMP` where
`FV`: finite volumes, `MP`: multi-phase flow.
......@@ -355,6 +372,7 @@ auto permeabilityAtPos(const GlobalPosition& globalPos) const
return aquiferK_;
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pspatialparams.hh`</span>
##
......@@ -369,6 +387,7 @@ Scalar porosityAtPos(const GlobalPosition& globalPos) const
return aquiferPorosity_;
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pspatialparams.hh`</span>
##
......@@ -384,6 +403,7 @@ auto fluidMatrixInteractionAtPos(const GlobalPosition& globalPos) const
return makeFluidMatrixInteraction(aquiferPcKrSwCurve_);
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pspatialparams.hh`</span>
##
......@@ -392,9 +412,10 @@ Set the (constant) temperature field in the domain:
```cpp
Scalar temperatureAtPos(const GlobalPosition& globalPos) const
{
return 273.15 + 20.0; // 20°C
return 273.15 + 30.0; // 30°C
}
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/injection2pspatialparams.hh`</span>
# Runtime parameters
......@@ -413,6 +434,7 @@ Cells = 24 16
[Problem]
Name = test
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/test/porousmediumflow/2p/nonisothermal/params.input`</span>
See [Part I: Runtime parameters](./params.html) for details.
......@@ -436,6 +458,7 @@ int main(int argc, char** argv)
// initialize MPI+X backends (mandatory)
Dumux::initialize(argc, argv);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -445,6 +468,7 @@ Parse runtime parameters:
// parse command line arguments and input file
Dumux::Parameters::init(argc, argv);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
See [Part I: Runtime parameters](./params.html) for details.
......@@ -456,6 +480,7 @@ Define an alias for the test problem type tag
using namespace Dumux;
using TypeTag = Properties::TTag::Injection2pCC;
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
The tag (tag alias) is used to extract types and values
via the property system (details on properties in [Part II: Property system](./properties.html)).
......@@ -473,6 +498,7 @@ gridManager.init();
const auto& grid = gridManager.grid();
const auto& leafGridView = grid.leafGridView();
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
More details on the grid in [Part I: Grid](./grid.html).
......@@ -490,6 +516,7 @@ auto gridGeometry = std::make_shared<GridGeometry>(leafGridView);
using Problem = GetPropType<TypeTag, Properties::Problem>;
auto problem = std::make_shared<Problem>(gridGeometry);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -508,6 +535,7 @@ auto gridVariables
= std::make_shared<GridVariables>(problem, gridGeometry);
gridVariables->init(x);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -528,6 +556,7 @@ vtkWriter.addVelocityOutput(
using IOFields = GetPropType<TypeTag, Properties::IOFields>;
IOFields::initOutputModule(vtkWriter);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -555,6 +584,7 @@ auto r = std::make_shared<SolutionVector>();
assembler->setLinearSystem(A, r);
assembler->assembleJacobianAndResidual(x);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-mainfile/exercise1pamain.cc`</span>
##
......@@ -570,6 +600,7 @@ auto linearSolver = std::make_shared<LinearSolver>(
(*r) *= -1.0; // solve Ax = -r to save update and copy
linearSolver->solve(*A, x, *r);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-mainfile/exercise1pamain.cc`</span>
##
......@@ -585,6 +616,7 @@ Solver solver(assembler, linearSolver);
// assemble & solve
solver.solve(x);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/test/porousmediumflow/1p/rootbenchmark/main.cc`</span>
##
......@@ -600,6 +632,7 @@ Solver solver(assembler, linearSolver);
// linearize & solve
solver.solve(x);
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-mainfile/exercise1pbmain.cc`</span>
##
......@@ -622,6 +655,7 @@ auto assembler = std::make_shared<Assembler>(
// assemble linear/non-linear problem as before
// ...
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -634,6 +668,7 @@ timeLoop->start(); do {
} while (!timeLoop->finished());
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -649,6 +684,7 @@ timeLoop->start(); do
xOld = x;
gridVariables->advanceTimeStep();
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
##
......@@ -667,6 +703,7 @@ Advancing the time loop to the next step:
// print final report
timeLoop->finalize(leafGridView.comm());
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/2pmain.cc`</span>
# Build system (CMake)
......@@ -753,6 +790,7 @@ by defining a name and source file:
dumux_add_test(NAME exercise_basic_2p
SOURCES 2pmain.cc)
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux-course/exercises/exercise-basic/CMakeLists.txt`</span>
## Build system
......@@ -772,6 +810,7 @@ dumux_add_test(
test_2p.input -Problem.Name 2p_box"
)
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/test/porousmediumflow/2p/incompressible/CMakeLists.txt`</span>
## Build system
......@@ -786,6 +825,7 @@ target_compile_definitions(
test_2p_incompressible_tpfa PUBLIC TYPETAG=TwoPIncompressibleTpfa
)
```
<span style="font-size: 0.4em; position: relative; top: -38px; color: gray;">File: `dumux/test/porousmediumflow/2p/incompressible/CMakeLists.txt`</span>
## Build system
......
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