[cleanup] Harmonize logical operators

See merge request !346

The update of the reference solution was necessary as the problem description
did not fit the implementation. The current time in an implicit Euler context
has to be t+1.

Kilian Weishaupt authored 8 years ago and Timo Koch committed 8 years ago

* Use ADL for std:: functions
* Adapt doxygen docu

Kilian Weishaupt authored 8 years ago and Timo Koch committed 8 years ago

* Adapt to new interface
* Fix error in neumann term (use wPhase density instead of gPhase density)
* Adapt ref files accordingly

Kilian Weishaupt authored 8 years ago and Timo Koch committed 8 years ago

* Adapt to new interface
* Rename variables in ref solution and CMakeList.txt
* Use \ to escape the brackets in CMakeList.txt

Beatrix Becker authored 8 years ago and Timo Koch committed 8 years ago

(cherry picked from commit 286ba6c7)

The tracer model solves transport equations for multiple tracers when
a velocity field is given by the user (possibly by a 1p simulation).

Note: tests still fail

Note: the box tests still fail

This commit also ports the 1pniconduction test to the new output module

Dennis Gläser authored 8 years ago and Timo Koch committed 8 years ago

- The laws store a pointer to the spatial parameters instead of an initial field (more user-friendly).
- The permeability type has to be stated publicly in the spatial parameters

Dennis Gläser authored 8 years ago and Timo Koch committed 8 years ago

The box test passes here, but strangely the cc test fails

Dennis Gläser authored 8 years ago and Timo Koch committed 8 years ago

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.[1p] port ni tests to new interface

The tests fail, but they do so because the output has changed. This has
to be checked again.

Dennis Gläser authored 8 years ago and Timo Koch committed 8 years ago

Unfortunately, the box 1p test does not pass. It remains to check why and
if it didn't do so before as well.

Fix/restart and episodes

For me it would be more intuitive to first advance the time level and then do all the processing and file writing. However this is more complicated, therefore I shifted the restart stuff to the same level as the vtk output stuff.

See merge request !310

[sequential grid adaptation] Fix problems due to commit 42dd5278

Set GridAdaptModel with second template argument (true/false for adaptivity) depending on AdaptiveGrid property. Include file for default initialization indicator. Clean-up.

See merge request !313

* Set the property for ImplicitBase and define default of 1.0.
* Remove any obsolete declarations from all ported models

Note that the niconvectionproblem has been ported before. That implementation
had in mind that an interface change of the spatial params might occur in the future
which does not allow a simple update of the volume variables. This commit brings it
back to the old approach. If the spatial parameter interface change happens we'll have to
change all the models anyway.