Use copydoc for BoxVolumeVariables::update.


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-seperated updateMaterial at the end of time step with that done after grid adaptation by introducing distinguishing bool. Compositional problem base class does that distinction.
Reviewd by Markus

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updateMaterialLaw function in base problem

   - GridAdapt: new function wasAdapted() -> returns true or false after
     call of adaptGrid(), new function init() -> calls init() function
     of grid adaption indicator (all indicators need an init() function!), new parameter adaptationInterval -> allows to adapt only at certain time steps,
   - ImpetProblem: updateMaterialLaw() is now called in the
     preTimeStepFunction() per default

   reviewed by Benjamin



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Transferred decoupled 2p2c fluidstate into more consequent file naming to please Christoph even more. This became possible because there is no more 2p2cfluidstate in the box models.
Reviewer Christoph

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Removed viscosity for standard output. 
Assignment of equilibrium mass fraction for nphase if it is not present mainly affects density of nphase. This will also result in slightly different fluxes due to central averageing in phase potential.


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-Reformatted output of pressure module
-overhauled upwinding: Fully Upwind and central implemented, fix for the case potential = 0.
-Prepared stable modules for merge of multiphyiscs and adaptive model:
-Total Concentration (P.V.) is now in cellData and not in FluidState
-MuPhys: FluidState that is present locally conceptually decoupled from subdomain.

Reviewed by Bernd

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Tiny code beautyifications.
(reviewed by klaus)


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transportCompIdx (former x1Idx) is now massOrMoleFracIdx
comp0Idx is now phaseCompIdx
comp1Idx is now transportCompIdx

reviewed by Klaus


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motivated by Christoph, but not reviewed as only minor change


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(review by vishal)


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delete deprecated spatialparameters

Reviewed by Christoph and Bernd


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(not reviewed but change in principle agreed by bernd)


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correction of the coordinate index for the specification of the pressure


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phaseIdx is called from the property system (default to nPhase)

wComp or comp1Idx -> transportCompIdx (transported component)
nComp or comp0Idx -> phaseCompIdx (main component of phase)

transportCompIdx is |1-phaseIdx|, because usually the transported
component of interest is the minor component of the phase. This allows
the to choose an arbitrary phase of a two-phase fluidsystem, if
wComp is the main component of wPhase and both have the same index with either 0 or 1.

Corrected index names for primary variables, they get the correct
primary variable index instead of the equation index;
massOrMoleFracIdx has been employed for the mass or mole fraction (seems
to be self-explanatory...)

Adapted also test problems for stokes2c, stokes2cni.

Reviewed bei Markus.



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reviewed by Christoph


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reviewed by Christoph 



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