With Opm release 2016.04, the module dune-cornerpoint has been
renamed to opm-grid. Interfaces changed without deprecation. There
doesn't seem to be a preprocessor macro to check for the employed
Opm version. Therefore, drop support for older versions and only
support 2016.04.

[vtk][test] Start vtk numbering with 0

this means
* the first vtk (normally the initial solution) is *-00000.vtu
* if all timesteps are writen the time step number and vtk number correspond

See merge request !175

this means
* the first vtk (normally the initial solution) is *-00000.vtu
* if all timesteps are writen the time step number and vtk number correspond

[cleanup][CMake] Skip on 77 is now the default for dune 3.0



See merge request !173

moved the "using" command in front of the doxygen description in the fulidsystems, as detailed in the FS315.

see also http://www.dumux.org/flyspray/index.php?do=details&task_id=315

See merge request !174

[fix/feature/PointSourceMap] adds computation of PointSourceMap as a Function wh…

…ich can be called and overloaded, is used in adaptive Grids

See merge request !171

Katharina Heck authored 8 years ago and Timo Koch committed 8 years ago

[fix/feature/PointSourceMap] adds computation of PointSourceMap as a Function which can be called and overloaded, is used in adaptive Grids

[doc] Adapt to upstream signature change of create_doc_install

* The macro signature changed. Now dumux runs successfully through configure step again and builds the handbook.
* Remove deprecated `FATHER_TARGET`,` DEFAULT_PDF` arguments for latex_document

See merge request !170

[bugfix][multidomain] Fix erroneous commit 37152c5d



See merge request !168

Feature/effectivepermeabilityrutqvisttsang



See merge request !165

Fix/installexternal



See merge request !167

The type of effectivePermeability is auto instead of a FieldMatrix. This
is more flexible and does not require dim as a template parameter.

Reviewed by heck

Instead of calculating it in the local residual, the effective permeability
is now calculated within a new file permeabilityrutqvisttsang.hh in the
folder dumux/material/fluidmatrixinteractions.
This is just one possible effective permeability model. Several others can be
added and set via the property EffectivePermeabilityModel.

Up to now, the permeabilities were averaged twice, first by calculating
the mean of the mean of the intrinsic permeabilities in the flux variables
and later by averaging the effective permeabilities in the local residual.
This is redundant. Now, only the mean of the effective permeability is
calculated in the local residual.
This change required to change the reference files for the sequential and
the parallel test.

Feaure/more robust air component

The NotImplemented previously made simulations fail if the Newton diverged for some reason. Instead we try again now
with smaller timestep.

See merge request !164

[3p3cni] Update ref.sol. after introduction of part.press. regularization

This updates the reference solution as discussed after !154.

See merge request !162

[changelog] Mention added method maxTimeStepSize

Deserves a mention because downstream modules implementing problem classes need to be adapted to compile.

See merge request !163

Cleanup/binfolder



See merge request !160

Move all testing related scripts to subfolder testing

I introduced a regularization for the calculation of partial pressures.

This is necessary to fix a problem that occured in Taraneh's flumevegas3p3cni example

See merge request !154

Feature/intersect bboxtrees

Add the ability to bounding box trees to intersect with other bounding box trees.

Add a test in `dumux/common/boundingboxtree/` testing BBoxTree construction, pointIntersection, treeIntersection.

The result is a vector of `BoundingBoxIntersections`. They contain a first and a second element index
of the respective first and second boundingBoxTree and the corners in global coordinates of the intersection geometry.

This implements only intersection of 3D with 1D elements. However it is possible to add other geometries by implementing the `GeometryCollision` class for e.g. 2D with 1D elements or 3D with 2D elements.

Merging this branch would remove the dependency on `dune-grid-glue` in `dumux-multidimension`.
It is also a step towards better well models where wells are actually one-dimensional domains intersecting
with the bulk grid cells.

TODO

* [x] Better documentation

See merge request !146

[timemanager] Add possibility to set a custom maxTimeStepSize() in problem

* User can e.g. specify a maxTimeStepSize depending on episodeIdx in problem
* Might be useful for problems with initialisation period

See merge request !159

* User can e.g. specify a maxTimeStepSize depending on episodeIdx in problem
* Might be useful for problems with initialisation period

Add subfolders codeutil and doc

[plotmateriallaw] Remove superfluous checking warning

Now the values are checked directly and only finite values are passed to gnuplot

See merge request !158

* The 3p kr() requires different arguments as the 2p kr()
* Wrong vector was pushed back

Now the values are checked directly and only finite values are passed to gnuplot